GMP-compliant iPS cell lines show widespread plasticity in a new set of differentiation workflows for cell replacement and cancer immunotherapy

Authors:
Terheyden-Keighley D, Hühne M, Berger T, Hiller B, Martins S, Gamerschlag A, Sabour D, Meffert A, Kislat A, Slotta C, Hafezi F, Lichte J, Sudheer S, Tessmer K, Psathaki K, Ader M, Kogler G, Greber B.
In:
Source: STEM CELLS TRANSLATIONALMEDICINE
Publication Date: (2024)
Issue: : szae047
Research Area:
Cancer Research/Cell Biology
Immunotherapy / Hematology
Stem Cells
Gene Expression
Basic Research
Molecular Biology
Cells used in publication:
Induced Pluripotent Stem Cell (iPS), human
Species: human
Tissue Origin:
Culture Media:
Platform:
4D-Nucleofector® X-Unit
Experiment

Gene editing
Knockouts were accomplished via nucleofection of RNP complexes (4D Nucleofector, Lonza, program CA-167, solution P4, 2 RNPs per gene). The optimized knockin procedure was based on nucleofecting 3 µg of donor vector in addition to a single gRNA targeting AAVS1. All nucleic acid sequences are given in Supplementary Table S4. Controls for unspecific integration were vector + irrelevant gRNA. Optimization of KI efficiencies and survival included details like allowing cell recovery and exposing them to lower temperatures (32 °C) after nucleofection.

Abstract

Cell therapeutic applications based on induced pluripotent stem cells (iPSCs) appear highly promising and challenging at the same time. Good manufacturing practice (GMP) regulations impose necessary yet demanding requirements for quality and consistency when manufacturing iPSCs and their differentiated progeny. Given the scarcity of accessible GMP iPSC lines, we have established a corresponding production workflow to generate the first set of compliant cell banks. Hence, these lines met a comprehensive set of release specifications and, for instance, displayed a low overall mutation load reflecting their neonatal origin, cord blood. Based on these iPSC lines, we have furthermore developed a set of GMP-compatible workflows enabling improved gene targeting at strongly enhanced efficiencies and directed differentiation into critical cell types: A new protocol for the generation of retinal pigment epithelium (RPE) features a high degree of simplicity and efficiency. Mesenchymal stromal cells (MSCs) derived from iPSCs displayed outstanding expansion capacity. A fully optimized cardiomyocyte differentiation protocol was characterized by a particularly high batch-to-batch consistency at purities above 95%. Finally, we introduce a universal immune cell induction platform that converts iPSCs into multipotent precursor cells. These hematopoietic precursors could selectively be stimulated to become macrophages, T cells, or natural killer (NK) cells. A switch in culture conditions upon NK-cell differentiation induced a several thousand-fold expansion, which opens up perspectives for upscaling this key cell type in a feeder cell-independent approach. Taken together, these cell lines and improved manipulation platforms will have broad utility in cell therapy as well as in basic research