Unleashing the potential of a low CpG Passer transposon for superior CAR-T cell therapy

Authors:
Zeng J, Sun Y, Fang Y, Wang X, Huang Q, Zhang P, Shao M, Wang P, Cheng J, Di M, Liu T, Qian Q. 
In:
Source: Frontiers in Immunology
Publication Date: (2025)
Issue: :
Research Area:
Cancer Research/Cell Biology
Immunotherapy / Hematology
Gene Expression
Basic Research
Molecular Biology
Regenerative medicine
Drug Discovery
Cells used in publication:
T cell, human stim.
Species: human
Tissue Origin: blood
Platform:
4D-Nucleofector® X-Unit
Experiment

Human primary T cell electroporation
Electroporation was performed 2-3 days after T cell stimulation, following the Lonza 4D manufacturer’s protocol. In brief, 1×10^7 prewashed T cells were resuspended in 100 µL electroporation buffer P3. A total of plasmid DNA (4 µg) and JL transposase mRNA (5 µg) were added to the cell suspension before electroporation.
Cells were then transferred into electroporation cuvettes. Programme EO-115 was chosen for electroporation. After electroporation, cells were immediately supplemented with a prewarmed medium and transferred from the cuvettes.
Transposition assay in CHO-K1 cells by GFP or Fluc
CHO-K1 cells were nucleofected with 2b-Nucleofector Reagent (Lonza # VVPA-1002) following the manufacturer’s protocol. Specifically, 1.5×106 CHO-K1 cells were cotransfected cells with plasmid DNA (4µg) containing the GFP (or Fluc) expression cassette and JL transposase mRNA (5µg). Following transfection, the cells were cultured over two weeks to assess the stability of GFP (or Fluc) expression in CHO-K1 cells. Subsequently, the cells were analyzed using fluorescence microscopy (OLYMPUS IX73) and flow cytometry (Cytek Northern Lights # NL1213), with passaging occurring every three days.
Jurkat cells electroporation
Jurkat cells were electroporated using a Lonza 4D electroporation system following the manufacturer’s instructions. In brief, 3×10^6 Jurkat cells were resuspended in 100 µL electroporation buffer (Lonza SE Cell Line 4D), and 4 µg of plasmid DNA and 5 µg of JL transposase mRNA were added to the cell suspension. Electroporation was performed using program SE-CL120. Post-electroporation, cells were immediately supplemented with prewarmed medium and transferred from the cuvettes.

Abstract

Background

To date, the non-viral vector Chimeric Antigen Receptor (CAR) T cell preparation platform, exemplified by transposons, has demonstrated significant potential in tumor immunotherapy and yielded positive results in multiple clinical trials. Nonetheless, non-methylated CpG sequences within plasmid DNA can elicit an inflammatory response via Toll-like receptor 9 (TLR9) during CAR-T cell preparation, adversely affecting transgene expression. Additionally, de novo DNA methylation programs promote T cell exhaustion, which poses a significant limitation for CAR-T cell therapy applications.

Methods

High-throughput liquid protein chip and CBA analyses were utilized to determine the expression levels of inflammatory factors. Flow cytometry and luciferase reporter assays were employed for mutation screening. BALB/c mice and M-NSG mice were used to evaluate the inflammatory response and efficacy of LCG CAR-T in vivo, with TIL grouping detected via immunohistochemistry.

Results

In this study, we modified the newly discovered Passer (JL) transposon to construct a low-CpG content transposon for CAR-T cell (LCG CAR-T cell) preparation. In vitro experiments demonstrated that LCG CAR-T cells prepared using this new transposon exhibited stronger cytotoxicity. In animal models, LCG CAR-T cells significantly inhibited tumor growth and increased the populations of CD4+CAR-T cells and tumor-infiltrating lymphocytes. Furthermore, LCG CAR-T cells modulated pro-inflammatory cytokine release, thereby reducing in vivo inflammatory responses and surpassing the effects observed with unmodified CAR-T cells.

Conclusions

Collectively, our results demonstrate the high safety and efficacy of non-viral, low CpG Passer transposon CAR-T cells, offering new avenues for improving CAR-T cell efficacy while minimizing in vivo inflammation.