CD155 density on target cells drives divergent natural killer cell responses owing to DNAM-1 loss

Authors:
Saunders PM, Oates CVL, Hare R, Burgess M, Vargas Pavia TA, Worboys JD, Davis DM, Brooks AG
In:
Source: J Immunol
Publication Date: (2025)
Issue: 4: vkaf293
Research Area:
Cancer Research/Cell Biology
Immunotherapy / Hematology
Gene Expression
Basic Research
Molecular Biology
Regenerative medicine
Cells used in publication:
K-562
Species: human
Tissue Origin: blood
Natural killer Cells (NK), human
Species: human
Tissue Origin: blood
293T
Species: human
Tissue Origin: kidney
Platform:
4D-Nucleofector® X-Unit
Experiment

CRISPR/Cas9 editing
DNAM-1 in parental 221 and CD155-transfected cell lines,  as well as CD155 and CD112 from K562 and 293T cells, was  edited using CRISPR/Cas9 technology. In brief, ribonucleoprotein (RNP) complexes were formed between synthetic guide  RNA (sgRNA) (CD226þ69947029 and CD226- 69947061;  PVRþ44647235 and PVR44647223; NECTIN2- 44865272  and NECTIN2- 44865280 from Synthego) and Cas9 protein  (Integrated DNA Technologies) and then added to 2 × 105 cells resuspended in Nucleofector Solution SF and Supplement  1 (Lonza) before nucleofection with the 4D-Nucleofector X  Unit, program CM130. Cells were sorted where necessary to 
achieve DNAM-1 or CD155/CD112 null cell lines. For editing  of primary NK cells, 1 × 106 NK cells resuspended in P3 Nucleofector media and Supplement 1 (P3 Primary Cell 4DNucleofector X Kit S, Lonza) were incubated with Cas9 protein and sgRNA before nucleofection with the 4D Nucleofector X Unit, program CM137. The sgRNAs used  for NK cells were DNAM-1: CD226þ69947029  and CD226- 69947061; TIGIT: TIGITþ114295552 and  TIGIT114295545; CD96: CD96þ111545092 and  CD96- 111545121; and NKG2D: KLRK1- 10386955 and  KLRK1- 10386987. NK cells were allowed to recover for 4  days at 37 °C, 5% CO2 with 100 U/mL IL-2 before sorting for  receptor negative populations, staining for CD56, CD3,  DNAM-1, TIGIT, NKG2D, and/or CD96, along with Fixable  Viability Dye eFluor 780. Sorted NK cells were then plated  onto irradiated PBMCs and 221 cells transfected with HLA-G,  along with 100 U/mL IL-2 and 1.5 ng/mL phytohemagglutinin  (Gibco Ltd) as described previously.34 Cells were expanded for  2 to 3 weeks before use in functional NK cell assays. 

Abstract

Activation of natural killer (NK) cells by transformed targets requires the engagement of activating receptors and commonly a concomitant loss  of inhibitory signaling. While the coactivating receptor DNAM-1 is involved in NK cell recognition of tumors expressing the nectin-like molecule  CD155, in many cancer types, high expression of CD155 is associated with a poor clinical prognosis. To assess the impact of ligand density on  NK cell function, recognition of target cells expressing low and high levels of CD155 was compared. While low levels of CD155 on target cells  augmented NK cell activation, most evident in elevated IFN-? responses, high levels of CD155 drove rapid, activation-induced downregulation  of DNAM-1 that did not result in enhanced IFN-? responses. High levels of CD155 also drove TIGIT loss from the NK cell surface; however,  gene editing of TIGIT from primary NK cells had no significant impact on target cell recognition. Although low levels of CD155 induced a degree  of DNAM-1 loss, the improved activation was still mediated through DNAM-1, as assessed through selective disruption of the interaction.  Similarly, NK cell recognition of targets expressing the nectin CD112, which also engages both DNAM-1 and TIGIT, resulted in modest loss of  DNAM-1 expression and heightened IFN-? responses. Together, these observations suggest that DNAM-1 recognition of its ligands is delicately  poised such that low avidity receptor engagement augments NK cell activation, and in particular IFN-? respons.